Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GARC_4530Hypothetical protein. (574 aa)    
Predicted Functional Partners:
GARC_4529
1-alkyl-2-acetylglycerophosphocholine esterase.
       0.773
pepQ-4
Xaa-Pro dipeptidase.
       0.678
GARC_1660
TonB-dependent receptor.
  
     0.513
GARC_1011
Phosphoglycerate mutase.
  
     0.477
GARC_2407
Hypothetical protein.
  
     0.457
GARC_0221
Hypothetical protein.
  
     0.439
GARC_0815
Outer membrane protein.
  
     0.434
GARC_1460
Hypothetical protein.
  
     0.416
GARC_0504
Iron complex outermembrane recepter protein.
  
     0.405
Your Current Organism:
Paraglaciecola arctica
NCBI taxonomy Id: 493475
Other names: Glaciecola arctica BSs20135, Glaciecola arctica str. BSs20135, Glaciecola arctica strain BSs20135, Glaciecola sp. BSs20135, P. arctica BSs20135, Paraglaciecola arctica BSs20135
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