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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nirBNitrite reductase (NAD(P)H) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (856 aa)    
Predicted Functional Partners:
nirD
Nitrite reductase (NAD(P)H) small subunit.
 0.999
narB
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 0.993
GARC_3427
MFS transporter, NNP family, nitrate/nitrite transporter.
 
 
 0.941
GARC_2099
Hypothetical protein.
 
 0.919
gdhB
NAD-specific glutamate dehydrogenase.
    
  0.884
gdh
Glutamate dehydrogenase; NADP+; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.883
hmp
Nitric oxide dioxygenase; Belongs to the globin family.
  
 
 0.865
glnA-3
Glutamine synthetase.
  
 
  0.860
glnA
Glutamine synthetase.
    
 0.793
glnA-2
Glutamine synthetase.
    
 0.793
Your Current Organism:
Paraglaciecola arctica
NCBI taxonomy Id: 493475
Other names: Glaciecola arctica BSs20135, Glaciecola arctica str. BSs20135, Glaciecola arctica strain BSs20135, Glaciecola sp. BSs20135, P. arctica BSs20135, Paraglaciecola arctica BSs20135
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