STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A068TQ59Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
A0A068UNA8
Uncharacterized protein.
  
     0.492
A0A068UKU3
Uncharacterized protein.
  
     0.473
A0A068TU58
Uncharacterized protein.
  
     0.465
A0A068VF39
Uncharacterized protein.
  
     0.456
A0A068TUC5
Uncharacterized protein.
  
     0.453
A0A068UFQ5
Uncharacterized protein.
  
     0.450
A0A068V6Y4
Uncharacterized protein.
  
     0.449
A0A068UG97
Peptidase_M14 domain-containing protein.
  
     0.428
A0A068V1U7
Uncharacterized protein.
  
     0.427
A0A068VM70
Uncharacterized protein.
  
     0.424
Your Current Organism:
Coffea canephora
NCBI taxonomy Id: 49390
Other names: C. canephora, Coffea canephora Pierre ex A.Froehner, Coffea canephora var. robusta, Coffea canephora var. robusta (L.Linden) A.Chev., Coffea robusta, Coffea robusta L.Linden, robusta coffee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.