STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A068UB64Uncharacterized protein. (682 aa)    
Predicted Functional Partners:
A0A068UY63
BZIP domain-containing protein.
    
 0.986
A0A068TTH2
Photolyase/cryptochrome alpha/beta domain-containing protein.
    
 0.944
A0A068TXM3
Photolyase/cryptochrome alpha/beta domain-containing protein.
    
 0.928
A0A068UI77
Uncharacterized protein.
    
 0.916
A0A068UUX8
Uncharacterized protein.
    
 0.901
A0A068U7R8
Uncharacterized protein.
    
 
 0.879
A0A068UVA8
Uncharacterized protein.
    
  0.878
A0A068V0V0
Uncharacterized protein.
  
 
 0.833
A0A068VIB8
Uncharacterized protein.
    
 0.779
A0A068TNX2
Uncharacterized protein.
    
 0.756
Your Current Organism:
Coffea canephora
NCBI taxonomy Id: 49390
Other names: C. canephora, Coffea canephora Pierre ex A.Froehner, Coffea canephora var. robusta, Coffea canephora var. robusta (L.Linden) A.Chev., Coffea robusta, Coffea robusta L.Linden, robusta coffee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.