STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A068UP39Uncharacterized protein. (348 aa)    
Predicted Functional Partners:
A0A068VBU2
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.895
A0A068VGB5
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.895
A0A068U6Q2
Uncharacterized protein.
    
 0.752
A0A068UFU0
Uncharacterized protein.
    
 0.671
A0A068URG2
Uncharacterized protein.
    
 0.671
A0A068UZ09
Uncharacterized protein.
    
 0.671
A0A068V430
Uncharacterized protein.
    
 0.671
A0A068UX10
Protein kinase domain-containing protein.
   
 0.642
A0A068VAC4
SnAC domain-containing protein.
    
 0.636
A0A068VFR1
Uncharacterized protein.
    
 0.636
Your Current Organism:
Coffea canephora
NCBI taxonomy Id: 49390
Other names: C. canephora, Coffea canephora Pierre ex A.Froehner, Coffea canephora var. robusta, Coffea canephora var. robusta (L.Linden) A.Chev., Coffea robusta, Coffea robusta L.Linden, robusta coffee
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