STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A068UXB9Uncharacterized protein. (283 aa)    
Predicted Functional Partners:
A0A068UMA4
Uncharacterized protein.
  
     0.514
A0A068UR14
PORR domain-containing protein.
  
     0.497
A0A068UID8
Uncharacterized protein.
  
     0.496
A0A068UCN3
Uncharacterized protein.
  
     0.471
A0A068TNL5
Uncharacterized protein.
  
     0.470
A0A068V995
Uncharacterized protein.
  
     0.470
A0A068VNN7
Uncharacterized protein.
  
     0.470
A0A068TM49
Uncharacterized protein.
  
     0.468
A0A068VGE3
Uncharacterized protein.
  
     0.468
A0A068UZD2
Uncharacterized protein.
  
     0.466
Your Current Organism:
Coffea canephora
NCBI taxonomy Id: 49390
Other names: C. canephora, Coffea canephora Pierre ex A.Froehner, Coffea canephora var. robusta, Coffea canephora var. robusta (L.Linden) A.Chev., Coffea robusta, Coffea robusta L.Linden, robusta coffee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.