Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A068VCU9Uncharacterized protein; Belongs to the protein kinase superfamily. (498 aa)    
Predicted Functional Partners:
A0A068UHC7
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.922
A0A068V866
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.922
A0A068TRN4
Glutamine synthetase.
    
 0.917
A0A068TQI8
Uncharacterized protein.
   
 0.891
A0A068U634
BHLH domain-containing protein.
   
 0.891
A0A068U3A2
Uncharacterized protein.
   
 0.882
A0A068UUI7
Uncharacterized protein.
   
 0.882
A0A068V3V9
Uncharacterized protein.
   
 0.864
A0A068U6Q2
Uncharacterized protein.
   
 0.822
A0A068TPS7
Glutamine synthetase.
    
 0.811
Your Current Organism:
Coffea canephora
NCBI taxonomy Id: 49390
Other names: C. canephora, Coffea canephora Pierre ex A.Froehner, Coffea canephora var. robusta, Coffea canephora var. robusta (L.Linden) A.Chev., Coffea robusta, Coffea robusta L.Linden, robusta coffee
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