STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A068VKL2Uncharacterized protein. (523 aa)    
Predicted Functional Partners:
A0A068TVR6
Glyco_hydr_116N domain-containing protein.
 
  
  0.958
A0A068UFZ7
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.934
A0A068TVX7
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
   
 0.927
A0A068VJZ0
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.921
A0A068TRC1
Rhodanese domain-containing protein.
   
 0.900
A0A068UZD0
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.900
A0A068UU19
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
   
 0.898
A0A068V8A3
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
   
 0.898
A0A068UA60
DAGKc domain-containing protein.
     
 0.860
A0A068UL02
Neutral ceramidase.
     
 0.852
Your Current Organism:
Coffea canephora
NCBI taxonomy Id: 49390
Other names: C. canephora, Coffea canephora Pierre ex A.Froehner, Coffea canephora var. robusta, Coffea canephora var. robusta (L.Linden) A.Chev., Coffea robusta, Coffea robusta L.Linden, robusta coffee
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