STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A068VKX1Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
A0A068V3Z4
Rhodanese domain-containing protein.
    
 0.856
A0A068U7F2
HECT domain-containing protein.
    
 0.768
A0A068V3W6
Thioredoxin domain-containing protein.
    
  0.675
A0A068VL58
Uncharacterized protein.
    
  0.675
A0A068VLP0
Uncharacterized protein.
    
  0.675
A0A068VMX2
Uncharacterized protein.
    
  0.675
A0A068TTQ1
Flavokinase domain-containing protein.
    
  0.661
A0A068V7P2
Flavokinase domain-containing protein.
    
  0.661
A0A068VMX9
Uncharacterized protein.
  
 0.640
A0A068UFJ9
WD_REPEATS_REGION domain-containing protein.
    
 0.635
Your Current Organism:
Coffea canephora
NCBI taxonomy Id: 49390
Other names: C. canephora, Coffea canephora Pierre ex A.Froehner, Coffea canephora var. robusta, Coffea canephora var. robusta (L.Linden) A.Chev., Coffea robusta, Coffea robusta L.Linden, robusta coffee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.