Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE54349.1 | SHE54395.1 | SAMN04487965_0119 | SAMN04487965_0120 | acyl-CoA thioesterase-2. | Transcriptional regulator, GntR family. | 0.545 |
SHE54349.1 | SHE72218.1 | SAMN04487965_0119 | SAMN04487965_0510 | acyl-CoA thioesterase-2. | Uncharacterized OsmC-related protein. | 0.413 |
SHE54349.1 | SHF99976.1 | SAMN04487965_0119 | SAMN04487965_3114 | acyl-CoA thioesterase-2. | acyl-CoA dehydrogenase. | 0.416 |
SHE54349.1 | SHG00100.1 | SAMN04487965_0119 | SAMN04487965_3118 | acyl-CoA thioesterase-2. | Acyl dehydratase. | 0.470 |
SHE54349.1 | SHG26664.1 | SAMN04487965_0119 | SAMN04487965_3651 | acyl-CoA thioesterase-2. | Acyl dehydratase. | 0.473 |
SHE54395.1 | SHE54349.1 | SAMN04487965_0120 | SAMN04487965_0119 | Transcriptional regulator, GntR family. | acyl-CoA thioesterase-2. | 0.545 |
SHE72218.1 | SHE54349.1 | SAMN04487965_0510 | SAMN04487965_0119 | Uncharacterized OsmC-related protein. | acyl-CoA thioesterase-2. | 0.413 |
SHF99976.1 | SHE54349.1 | SAMN04487965_3114 | SAMN04487965_0119 | acyl-CoA dehydrogenase. | acyl-CoA thioesterase-2. | 0.416 |
SHF99976.1 | SHG00100.1 | SAMN04487965_3114 | SAMN04487965_3118 | acyl-CoA dehydrogenase. | Acyl dehydratase. | 0.723 |
SHF99976.1 | SHG26664.1 | SAMN04487965_3114 | SAMN04487965_3651 | acyl-CoA dehydrogenase. | Acyl dehydratase. | 0.471 |
SHG00100.1 | SHE54349.1 | SAMN04487965_3118 | SAMN04487965_0119 | Acyl dehydratase. | acyl-CoA thioesterase-2. | 0.470 |
SHG00100.1 | SHF99976.1 | SAMN04487965_3118 | SAMN04487965_3114 | Acyl dehydratase. | acyl-CoA dehydrogenase. | 0.723 |
SHG26664.1 | SHE54349.1 | SAMN04487965_3651 | SAMN04487965_0119 | Acyl dehydratase. | acyl-CoA thioesterase-2. | 0.473 |
SHG26664.1 | SHF99976.1 | SAMN04487965_3651 | SAMN04487965_3114 | Acyl dehydratase. | acyl-CoA dehydrogenase. | 0.471 |