Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHE58302.1 | SHE58377.1 | SAMN04487965_0213 | SAMN04487965_0214 | 4Fe-4S dicluster domain-containing protein. | Cyclic nucleotide-binding domain-containing protein. | 0.952 |
| SHE58302.1 | SHE58428.1 | SAMN04487965_0213 | SAMN04487965_0215 | 4Fe-4S dicluster domain-containing protein. | NAD(P)H-flavin reductase. | 0.996 |
| SHE58302.1 | SHE58481.1 | SAMN04487965_0213 | SAMN04487965_0216 | 4Fe-4S dicluster domain-containing protein. | Coenzyme F420-reducing hydrogenase, gamma subunit. | 0.966 |
| SHE58302.1 | SHE58529.1 | SAMN04487965_0213 | SAMN04487965_0217 | 4Fe-4S dicluster domain-containing protein. | Coenzyme F420-reducing hydrogenase, alpha subunit. | 0.966 |
| SHE58302.1 | SHE58596.1 | SAMN04487965_0213 | SAMN04487965_0218 | 4Fe-4S dicluster domain-containing protein. | Hydrogenase maturation protease. | 0.937 |
| SHE58302.1 | SHE58654.1 | SAMN04487965_0213 | SAMN04487965_0219 | 4Fe-4S dicluster domain-containing protein. | Hydrogenase nickel incorporation protein HypA/HybF. | 0.697 |
| SHE58302.1 | SHE58701.1 | SAMN04487965_0213 | SAMN04487965_0220 | 4Fe-4S dicluster domain-containing protein. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.732 |
| SHE58302.1 | SHE58748.1 | SAMN04487965_0213 | SAMN04487965_0221 | 4Fe-4S dicluster domain-containing protein. | Hydrogenase expression/formation protein HypC. | 0.746 |
| SHE58302.1 | SHE58794.1 | SAMN04487965_0213 | SAMN04487965_0222 | 4Fe-4S dicluster domain-containing protein. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.722 |
| SHE58302.1 | SHE58846.1 | SAMN04487965_0213 | SAMN04487965_0223 | 4Fe-4S dicluster domain-containing protein. | Hydrogenase expression/formation protein HypE. | 0.754 |
| SHE58377.1 | SHE58302.1 | SAMN04487965_0214 | SAMN04487965_0213 | Cyclic nucleotide-binding domain-containing protein. | 4Fe-4S dicluster domain-containing protein. | 0.952 |
| SHE58377.1 | SHE58428.1 | SAMN04487965_0214 | SAMN04487965_0215 | Cyclic nucleotide-binding domain-containing protein. | NAD(P)H-flavin reductase. | 0.947 |
| SHE58377.1 | SHE58481.1 | SAMN04487965_0214 | SAMN04487965_0216 | Cyclic nucleotide-binding domain-containing protein. | Coenzyme F420-reducing hydrogenase, gamma subunit. | 0.928 |
| SHE58377.1 | SHE58529.1 | SAMN04487965_0214 | SAMN04487965_0217 | Cyclic nucleotide-binding domain-containing protein. | Coenzyme F420-reducing hydrogenase, alpha subunit. | 0.926 |
| SHE58377.1 | SHE58596.1 | SAMN04487965_0214 | SAMN04487965_0218 | Cyclic nucleotide-binding domain-containing protein. | Hydrogenase maturation protease. | 0.929 |
| SHE58377.1 | SHE58654.1 | SAMN04487965_0214 | SAMN04487965_0219 | Cyclic nucleotide-binding domain-containing protein. | Hydrogenase nickel incorporation protein HypA/HybF. | 0.697 |
| SHE58377.1 | SHE58701.1 | SAMN04487965_0214 | SAMN04487965_0220 | Cyclic nucleotide-binding domain-containing protein. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.701 |
| SHE58377.1 | SHE58748.1 | SAMN04487965_0214 | SAMN04487965_0221 | Cyclic nucleotide-binding domain-containing protein. | Hydrogenase expression/formation protein HypC. | 0.740 |
| SHE58377.1 | SHE58794.1 | SAMN04487965_0214 | SAMN04487965_0222 | Cyclic nucleotide-binding domain-containing protein. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.694 |
| SHE58377.1 | SHE58846.1 | SAMN04487965_0214 | SAMN04487965_0223 | Cyclic nucleotide-binding domain-containing protein. | Hydrogenase expression/formation protein HypE. | 0.691 |
page 1 of 6