Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE70437.1 | SHE70476.1 | SAMN04487965_0472 | SAMN04487965_0473 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.445 |
SHE70476.1 | SHE70437.1 | SAMN04487965_0473 | SAMN04487965_0472 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.445 |
SHE70476.1 | SHE70520.1 | SAMN04487965_0473 | SAMN04487965_0474 | Transcriptional regulator, TetR family. | Citronellol/citronellal dehydrogenase. | 0.512 |
SHE70476.1 | SHE70601.1 | SAMN04487965_0473 | SAMN04487965_0475 | Transcriptional regulator, TetR family. | geranyl-CoA carboxylase beta subunit. | 0.692 |
SHE70476.1 | SHE70657.1 | SAMN04487965_0473 | SAMN04487965_0476 | Transcriptional regulator, TetR family. | citronellyl-CoA dehydrogenase. | 0.494 |
SHE70476.1 | SHE70705.1 | SAMN04487965_0473 | SAMN04487965_0477 | Transcriptional regulator, TetR family. | isohexenylglutaconyl-CoA hydratase. | 0.480 |
SHE70476.1 | SHE70770.1 | SAMN04487965_0473 | SAMN04487965_0478 | Transcriptional regulator, TetR family. | geranyl-CoA carboxylase alpha subunit. | 0.464 |
SHE70520.1 | SHE70476.1 | SAMN04487965_0474 | SAMN04487965_0473 | Citronellol/citronellal dehydrogenase. | Transcriptional regulator, TetR family. | 0.512 |
SHE70520.1 | SHE70601.1 | SAMN04487965_0474 | SAMN04487965_0475 | Citronellol/citronellal dehydrogenase. | geranyl-CoA carboxylase beta subunit. | 0.823 |
SHE70520.1 | SHE70657.1 | SAMN04487965_0474 | SAMN04487965_0476 | Citronellol/citronellal dehydrogenase. | citronellyl-CoA dehydrogenase. | 0.780 |
SHE70520.1 | SHE70705.1 | SAMN04487965_0474 | SAMN04487965_0477 | Citronellol/citronellal dehydrogenase. | isohexenylglutaconyl-CoA hydratase. | 0.658 |
SHE70520.1 | SHE70770.1 | SAMN04487965_0474 | SAMN04487965_0478 | Citronellol/citronellal dehydrogenase. | geranyl-CoA carboxylase alpha subunit. | 0.639 |
SHE70601.1 | SHE70476.1 | SAMN04487965_0475 | SAMN04487965_0473 | geranyl-CoA carboxylase beta subunit. | Transcriptional regulator, TetR family. | 0.692 |
SHE70601.1 | SHE70520.1 | SAMN04487965_0475 | SAMN04487965_0474 | geranyl-CoA carboxylase beta subunit. | Citronellol/citronellal dehydrogenase. | 0.823 |
SHE70601.1 | SHE70657.1 | SAMN04487965_0475 | SAMN04487965_0476 | geranyl-CoA carboxylase beta subunit. | citronellyl-CoA dehydrogenase. | 0.952 |
SHE70601.1 | SHE70705.1 | SAMN04487965_0475 | SAMN04487965_0477 | geranyl-CoA carboxylase beta subunit. | isohexenylglutaconyl-CoA hydratase. | 0.926 |
SHE70601.1 | SHE70770.1 | SAMN04487965_0475 | SAMN04487965_0478 | geranyl-CoA carboxylase beta subunit. | geranyl-CoA carboxylase alpha subunit. | 0.996 |
SHE70657.1 | SHE70476.1 | SAMN04487965_0476 | SAMN04487965_0473 | citronellyl-CoA dehydrogenase. | Transcriptional regulator, TetR family. | 0.494 |
SHE70657.1 | SHE70520.1 | SAMN04487965_0476 | SAMN04487965_0474 | citronellyl-CoA dehydrogenase. | Citronellol/citronellal dehydrogenase. | 0.780 |
SHE70657.1 | SHE70601.1 | SAMN04487965_0476 | SAMN04487965_0475 | citronellyl-CoA dehydrogenase. | geranyl-CoA carboxylase beta subunit. | 0.952 |
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