STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE72697.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
SHF61514.1
Von Willebrand factor type A domain-containing protein.
  
     0.737
SHF61436.1
Biopolymer transport protein ExbB/TolQ.
  
     0.715
SHF74988.1
Acetyltransferase (GNAT) family protein.
  
     0.713
SHF19713.1
Protein of unknown function.
  
     0.703
SHF20381.1
Hypothetical protein.
  
     0.688
SHF61366.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
     0.668
SHE83435.1
PDZ domain-containing protein.
  
     0.661
SHG24919.1
Hypothetical protein.
  
     0.647
SHF91899.1
Hypothetical protein.
  
     0.637
SHG23822.1
Putative salt-induced outer membrane protein YdiY.
  
     0.636
Your Current Organism:
Microbulbifer donghaiensis
NCBI taxonomy Id: 494016
Other names: CGMCC 1.7063, JCM 15145, M. donghaiensis, Microbulbifer donghaiensis Wang et al. 2009, Microbulbifer sp. CN85, strain CN85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.