Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE69711.1 | SHF13691.1 | SAMN04487965_0456 | SAMN04487965_1453 | Hypothetical protein. | Glycosyl transferase family 64 domain-containing protein. | 0.493 |
SHF13691.1 | SHE69711.1 | SAMN04487965_1453 | SAMN04487965_0456 | Glycosyl transferase family 64 domain-containing protein. | Hypothetical protein. | 0.493 |
SHF13691.1 | SHF13733.1 | SAMN04487965_1453 | SAMN04487965_1454 | Glycosyl transferase family 64 domain-containing protein. | HD domain-containing protein. | 0.404 |
SHF13691.1 | SHF23063.1 | SAMN04487965_1453 | SAMN04487965_1690 | Glycosyl transferase family 64 domain-containing protein. | Capsular exopolysaccharide family. | 0.459 |
SHF13691.1 | SHF87126.1 | SAMN04487965_1453 | SAMN04487965_2812 | Glycosyl transferase family 64 domain-containing protein. | Tetratricopeptide repeat-containing protein. | 0.469 |
SHF13691.1 | SHF87693.1 | SAMN04487965_1453 | SAMN04487965_2828 | Glycosyl transferase family 64 domain-containing protein. | PhoP regulatory network protein YrbL. | 0.855 |
SHF13691.1 | SHG13109.1 | SAMN04487965_1453 | SAMN04487965_3358 | Glycosyl transferase family 64 domain-containing protein. | Hypothetical protein. | 0.900 |
SHF13733.1 | SHF13691.1 | SAMN04487965_1454 | SAMN04487965_1453 | HD domain-containing protein. | Glycosyl transferase family 64 domain-containing protein. | 0.404 |
SHF23063.1 | SHF13691.1 | SAMN04487965_1690 | SAMN04487965_1453 | Capsular exopolysaccharide family. | Glycosyl transferase family 64 domain-containing protein. | 0.459 |
SHF87126.1 | SHF13691.1 | SAMN04487965_2812 | SAMN04487965_1453 | Tetratricopeptide repeat-containing protein. | Glycosyl transferase family 64 domain-containing protein. | 0.469 |
SHF87126.1 | SHF87693.1 | SAMN04487965_2812 | SAMN04487965_2828 | Tetratricopeptide repeat-containing protein. | PhoP regulatory network protein YrbL. | 0.651 |
SHF87693.1 | SHF13691.1 | SAMN04487965_2828 | SAMN04487965_1453 | PhoP regulatory network protein YrbL. | Glycosyl transferase family 64 domain-containing protein. | 0.855 |
SHF87693.1 | SHF87126.1 | SAMN04487965_2828 | SAMN04487965_2812 | PhoP regulatory network protein YrbL. | Tetratricopeptide repeat-containing protein. | 0.651 |
SHG13109.1 | SHF13691.1 | SAMN04487965_3358 | SAMN04487965_1453 | Hypothetical protein. | Glycosyl transferase family 64 domain-containing protein. | 0.900 |