Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE50539.1 | SHE51080.1 | SAMN04487965_0036 | SAMN04487965_0048 | Hypothetical protein. | Peptidoglycan-binding protein, CsiV. | 0.404 |
SHE50539.1 | SHF18497.1 | SAMN04487965_0036 | SAMN04487965_1573 | Hypothetical protein. | Hypothetical protein. | 0.697 |
SHE50539.1 | SHF18533.1 | SAMN04487965_0036 | SAMN04487965_1574 | Hypothetical protein. | Hypothetical protein; Non-canonical start codon; manually curated. | 0.487 |
SHE50539.1 | SHF34305.1 | SAMN04487965_0036 | SAMN04487965_1986 | Hypothetical protein. | Protein of unknown function. | 0.664 |
SHE50539.1 | SHF97813.1 | SAMN04487965_0036 | SAMN04487965_3053 | Hypothetical protein. | Hypothetical protein. | 0.736 |
SHE51080.1 | SHE50539.1 | SAMN04487965_0048 | SAMN04487965_0036 | Peptidoglycan-binding protein, CsiV. | Hypothetical protein. | 0.404 |
SHE51080.1 | SHF18497.1 | SAMN04487965_0048 | SAMN04487965_1573 | Peptidoglycan-binding protein, CsiV. | Hypothetical protein. | 0.600 |
SHE51080.1 | SHF18533.1 | SAMN04487965_0048 | SAMN04487965_1574 | Peptidoglycan-binding protein, CsiV. | Hypothetical protein; Non-canonical start codon; manually curated. | 0.592 |
SHE51080.1 | SHF34305.1 | SAMN04487965_0048 | SAMN04487965_1986 | Peptidoglycan-binding protein, CsiV. | Protein of unknown function. | 0.632 |
SHE51080.1 | SHF97813.1 | SAMN04487965_0048 | SAMN04487965_3053 | Peptidoglycan-binding protein, CsiV. | Hypothetical protein. | 0.667 |
SHE64840.1 | SHE69435.1 | SAMN04487965_0344 | SAMN04487965_0450 | Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily. | Methyltransferase domain-containing protein. | 0.583 |
SHE64840.1 | SHF18497.1 | SAMN04487965_0344 | SAMN04487965_1573 | Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily. | Hypothetical protein. | 0.460 |
SHE64840.1 | SHF34305.1 | SAMN04487965_0344 | SAMN04487965_1986 | Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily. | Protein of unknown function. | 0.628 |
SHE64840.1 | SHF97813.1 | SAMN04487965_0344 | SAMN04487965_3053 | Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily. | Hypothetical protein. | 0.519 |
SHE69435.1 | SHE64840.1 | SAMN04487965_0450 | SAMN04487965_0344 | Methyltransferase domain-containing protein. | Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily. | 0.583 |
SHE69435.1 | SHF18497.1 | SAMN04487965_0450 | SAMN04487965_1573 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.675 |
SHE69435.1 | SHF34305.1 | SAMN04487965_0450 | SAMN04487965_1986 | Methyltransferase domain-containing protein. | Protein of unknown function. | 0.708 |
SHE69435.1 | SHF97813.1 | SAMN04487965_0450 | SAMN04487965_3053 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.521 |
SHF18497.1 | SHE50539.1 | SAMN04487965_1573 | SAMN04487965_0036 | Hypothetical protein. | Hypothetical protein. | 0.697 |
SHF18497.1 | SHE51080.1 | SAMN04487965_1573 | SAMN04487965_0048 | Hypothetical protein. | Peptidoglycan-binding protein, CsiV. | 0.600 |
page 1 of 3