STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF54104.1Imidazolonepropionase. (681 aa)    
Predicted Functional Partners:
SHF54140.1
Hypothetical protein.
       0.709
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.686
SHE74788.1
Imidazolonepropionase.
  
     0.545
SHF19874.1
Phosphohistidine phosphatase SixA.
  
     0.528
SHF80387.1
Glyoxalase-like domain-containing protein.
  
     0.521
hutH
Histidine ammonia-lyase.
  
  
 0.494
SHF36026.1
Histidine ammonia-lyase.
  
  
 0.494
SHF14360.1
Dipeptidyl-peptidase-4.
  
    0.481
SHF62587.1
Zn-dependent amino-or carboxypeptidase, M28 family.
  
     0.477
pepQ-2
Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position.
 
     0.474
Your Current Organism:
Microbulbifer donghaiensis
NCBI taxonomy Id: 494016
Other names: CGMCC 1.7063, JCM 15145, M. donghaiensis, Microbulbifer donghaiensis Wang et al. 2009, Microbulbifer sp. CN85, strain CN85
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