Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF19713.1 | SHF72821.1 | SAMN04487965_1604 | SAMN04487965_2556 | Protein of unknown function. | Hypothetical protein. | 0.764 |
SHF19713.1 | SHF72964.1 | SAMN04487965_1604 | SAMN04487965_2560 | Protein of unknown function. | Rhomboid family protein. | 0.498 |
SHF26678.1 | SHF72964.1 | SAMN04487965_1785 | SAMN04487965_2560 | Regulator of protease activity HflC, stomatin/prohibitin superfamily. | Rhomboid family protein. | 0.508 |
SHF53555.1 | SHF72964.1 | SAMN04487965_2181 | SAMN04487965_2560 | Regulator of protease activity HflC, stomatin/prohibitin superfamily. | Rhomboid family protein. | 0.508 |
SHF72821.1 | SHF19713.1 | SAMN04487965_2556 | SAMN04487965_1604 | Hypothetical protein. | Protein of unknown function. | 0.764 |
SHF72821.1 | SHF72964.1 | SAMN04487965_2556 | SAMN04487965_2560 | Hypothetical protein. | Rhomboid family protein. | 0.612 |
SHF72964.1 | SHF19713.1 | SAMN04487965_2560 | SAMN04487965_1604 | Rhomboid family protein. | Protein of unknown function. | 0.498 |
SHF72964.1 | SHF26678.1 | SAMN04487965_2560 | SAMN04487965_1785 | Rhomboid family protein. | Regulator of protease activity HflC, stomatin/prohibitin superfamily. | 0.508 |
SHF72964.1 | SHF53555.1 | SAMN04487965_2560 | SAMN04487965_2181 | Rhomboid family protein. | Regulator of protease activity HflC, stomatin/prohibitin superfamily. | 0.508 |
SHF72964.1 | SHF72821.1 | SAMN04487965_2560 | SAMN04487965_2556 | Rhomboid family protein. | Hypothetical protein. | 0.612 |
SHF72964.1 | SHF73053.1 | SAMN04487965_2560 | SAMN04487965_2562 | Rhomboid family protein. | Mechanosensitive ion channel. | 0.603 |
SHF72964.1 | SHF78811.1 | SAMN04487965_2560 | SAMN04487965_2703 | Rhomboid family protein. | N-acetylmuramoyl-L-alanine amidase. | 0.715 |
SHF72964.1 | glsA | SAMN04487965_2560 | SAMN04487965_2561 | Rhomboid family protein. | L-glutaminase; Belongs to the glutaminase family. | 0.553 |
SHF72964.1 | tatA | SAMN04487965_2560 | SAMN04487965_1777 | Rhomboid family protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.707 |
SHF72964.1 | tatA-2 | SAMN04487965_2560 | SAMN04487965_3557 | Rhomboid family protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.707 |
SHF72964.1 | tatB | SAMN04487965_2560 | SAMN04487965_1776 | Rhomboid family protein. | Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.532 |
SHF73053.1 | SHF72964.1 | SAMN04487965_2562 | SAMN04487965_2560 | Mechanosensitive ion channel. | Rhomboid family protein. | 0.603 |
SHF73053.1 | glsA | SAMN04487965_2562 | SAMN04487965_2561 | Mechanosensitive ion channel. | L-glutaminase; Belongs to the glutaminase family. | 0.714 |
SHF78811.1 | SHF72964.1 | SAMN04487965_2703 | SAMN04487965_2560 | N-acetylmuramoyl-L-alanine amidase. | Rhomboid family protein. | 0.715 |
glsA | SHF72964.1 | SAMN04487965_2561 | SAMN04487965_2560 | L-glutaminase; Belongs to the glutaminase family. | Rhomboid family protein. | 0.553 |
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