Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF53738.1 | SHF89883.1 | SAMN04487965_2186 | SAMN04487965_2896 | PhnB protein. | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | 0.499 |
SHF53738.1 | SHG04333.1 | SAMN04487965_2186 | SAMN04487965_3175 | PhnB protein. | Uncharacterized conserved protein. | 0.555 |
SHF53738.1 | SHG04447.1 | SAMN04487965_2186 | SAMN04487965_3178 | PhnB protein. | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | 0.525 |
SHF53738.1 | SHG26840.1 | SAMN04487965_2186 | SAMN04487965_3656 | PhnB protein. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.474 |
SHF89852.1 | SHF89883.1 | SAMN04487965_2895 | SAMN04487965_2896 | PhnB protein. | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | 0.716 |
SHF89852.1 | SHG04333.1 | SAMN04487965_2895 | SAMN04487965_3175 | PhnB protein. | Uncharacterized conserved protein. | 0.952 |
SHF89852.1 | SHG04447.1 | SAMN04487965_2895 | SAMN04487965_3178 | PhnB protein. | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | 0.752 |
SHF89883.1 | SHF53738.1 | SAMN04487965_2896 | SAMN04487965_2186 | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | PhnB protein. | 0.499 |
SHF89883.1 | SHF89852.1 | SAMN04487965_2896 | SAMN04487965_2895 | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | PhnB protein. | 0.716 |
SHF89883.1 | SHG04333.1 | SAMN04487965_2896 | SAMN04487965_3175 | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | Uncharacterized conserved protein. | 0.792 |
SHF89883.1 | SHG19654.1 | SAMN04487965_2896 | SAMN04487965_3496 | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | 0.415 |
SHG04294.1 | SHG04333.1 | SAMN04487965_3174 | SAMN04487965_3175 | Long-chain acyl-CoA synthetase. | Uncharacterized conserved protein. | 0.414 |
SHG04333.1 | SHF53738.1 | SAMN04487965_3175 | SAMN04487965_2186 | Uncharacterized conserved protein. | PhnB protein. | 0.555 |
SHG04333.1 | SHF89852.1 | SAMN04487965_3175 | SAMN04487965_2895 | Uncharacterized conserved protein. | PhnB protein. | 0.952 |
SHG04333.1 | SHF89883.1 | SAMN04487965_3175 | SAMN04487965_2896 | Uncharacterized conserved protein. | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | 0.792 |
SHG04333.1 | SHG04294.1 | SAMN04487965_3175 | SAMN04487965_3174 | Uncharacterized conserved protein. | Long-chain acyl-CoA synthetase. | 0.414 |
SHG04333.1 | SHG04367.1 | SAMN04487965_3175 | SAMN04487965_3176 | Uncharacterized conserved protein. | Uncharacterized conserved protein YbaA, DUF1428 family. | 0.767 |
SHG04333.1 | SHG04403.1 | SAMN04487965_3175 | SAMN04487965_3177 | Uncharacterized conserved protein. | Uncharacterized membrane protein, DUF373 family. | 0.467 |
SHG04333.1 | SHG04447.1 | SAMN04487965_3175 | SAMN04487965_3178 | Uncharacterized conserved protein. | Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. | 0.574 |
SHG04333.1 | SHG19654.1 | SAMN04487965_3175 | SAMN04487965_3496 | Uncharacterized conserved protein. | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | 0.515 |
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