STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900010755_01742Unannotated protein. (256 aa)    
Predicted Functional Partners:
GCA_900010755_01741
Unannotated protein.
 
 0.990
GCA_900010755_00826
Unannotated protein.
 
  
 
0.965
GCA_900010755_01955
Unannotated protein.
 
   
 
0.959
GCA_900010755_01743
Unannotated protein.
 
     0.846
GCA_900010755_00947
Unannotated protein.
 
 0.818
GCA_900010755_01738
Unannotated protein.
   
  0.803
GCA_900010755_01739
Unannotated protein.
    
 
0.803
GCA_900010755_01622
Unannotated protein.
 
 
  0.773
GCA_900010755_01737
Unannotated protein.
    
  0.769
GCA_900010755_02690
Unannotated protein.
 
 
  0.766
Your Current Organism:
Paeniglutamicibacter antarcticus
NCBI taxonomy Id: 494023
Other names: Arthrobacter antarcticus, Arthrobacter antarcticus Pindi et al. 2010, Arthrobacter sp. SPC26, LMG 24542, LMG:24542, NCCB 100228, P. antarcticus, Paeniglutamicibacter antarcticus (Pindi et al. 2010) Busse 2016, strain SPC 26, strain SPC26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.