STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900010755_02400Unannotated protein. (468 aa)    
Predicted Functional Partners:
GCA_900010755_02401
Unannotated protein.
 0.999
GCA_900010755_02916
Unannotated protein.
 0.969
GCA_900010755_02908
Unannotated protein.
  
 0.943
GCA_900010755_02399
Unannotated protein.
 
  
 0.933
GCA_900010755_00590
Unannotated protein.
 
 0.908
GCA_900010755_02402
Unannotated protein.
 
 
 0.903
GCA_900010755_02397
Unannotated protein.
 
   
 0.895
GCA_900010755_02398
Unannotated protein.
 
   
 0.887
GCA_900010755_02403
Unannotated protein.
 
 
 0.878
GCA_900010755_02171
Unannotated protein.
 
  
 0.761
Your Current Organism:
Paeniglutamicibacter antarcticus
NCBI taxonomy Id: 494023
Other names: Arthrobacter antarcticus, Arthrobacter antarcticus Pindi et al. 2010, Arthrobacter sp. SPC26, LMG 24542, LMG:24542, NCCB 100228, P. antarcticus, Paeniglutamicibacter antarcticus (Pindi et al. 2010) Busse 2016, strain SPC 26, strain SPC26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.