STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAB42522.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
OAB42404.1
Dihydrolipoyl dehydrogenase; E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.789
OAB42405.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.785
OAB42406.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.783
OAB33774.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.588
OAB45534.1
Glycosyl hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.553
OAB42654.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.521
OAB44775.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.477
OAB41616.1
Prolyl 4-hydroxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
OAB43007.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.446
PGLA_12545
Transposase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
Your Current Organism:
Paenibacillus glacialis
NCBI taxonomy Id: 494026
Other names: DSM 22343, NCCB 100252, P. glacialis, Paenibacillus glacialis Kishore et al. 2010, Paenibacillus sp. KFC91, strain KFC91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.