STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAB42491.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (423 aa)    
Predicted Functional Partners:
OAB42493.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.988
OAB35315.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.864
OAB41663.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.859
OAB46300.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.858
OAB42122.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.858
PGLA_20740
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.858
OAB43265.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.853
OAB41986.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.851
OAB46020.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.850
OAB41506.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.850
Your Current Organism:
Paenibacillus glacialis
NCBI taxonomy Id: 494026
Other names: DSM 22343, NCCB 100252, P. glacialis, Paenibacillus glacialis Kishore et al. 2010, Paenibacillus sp. KFC91, strain KFC91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.