STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAB40958.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (112 aa)    
Predicted Functional Partners:
OAB40957.1
RNA polymerase sigma factor SigY; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
       0.806
OAB40979.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.801
OAB40959.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.801
OAB40960.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.801
OAB40961.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.801
OAB40962.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
OAB40954.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.427
OAB40955.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.427
OAB40956.1
Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.427
Your Current Organism:
Paenibacillus glacialis
NCBI taxonomy Id: 494026
Other names: DSM 22343, NCCB 100252, P. glacialis, Paenibacillus glacialis Kishore et al. 2010, Paenibacillus sp. KFC91, strain KFC91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.