STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAB40141.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (347 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
  
 
  0.738
OAB40694.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.730
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.700
cheB-2
Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
       0.675
OAB32893.1
Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
OAB33962.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.540
OAB40139.1
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.529
OAB40140.1
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.529
OAB40138.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.484
OAB40137.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.440
Your Current Organism:
Paenibacillus glacialis
NCBI taxonomy Id: 494026
Other names: DSM 22343, NCCB 100252, P. glacialis, Paenibacillus glacialis Kishore et al. 2010, Paenibacillus sp. KFC91, strain KFC91
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