Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OAB38411.1 | OAB40854.1 | PGLA_20175 | PGLA_17900 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
OAB38411.1 | OAB42208.1 | PGLA_20175 | PGLA_12930 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type I glyceraldehyde-3-phosphate dehydrogenase; NAD-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.564 |
OAB38411.1 | OAB44335.1 | PGLA_20175 | PGLA_06645 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.415 |
OAB38411.1 | fabV | PGLA_20175 | PGLA_20170 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flavoprotein; Involved in the fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to a coenzyme A (CoA); Belongs to the TER reductase family. | 0.515 |
OAB38411.1 | thyA | PGLA_20175 | PGLA_07870 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.460 |
OAB40854.1 | OAB38411.1 | PGLA_17900 | PGLA_20175 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
OAB42208.1 | OAB38411.1 | PGLA_12930 | PGLA_20175 | Type I glyceraldehyde-3-phosphate dehydrogenase; NAD-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.564 |
OAB44335.1 | OAB38411.1 | PGLA_06645 | PGLA_20175 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.415 |
fabV | OAB38411.1 | PGLA_20170 | PGLA_20175 | Flavoprotein; Involved in the fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to a coenzyme A (CoA); Belongs to the TER reductase family. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.515 |
thyA | OAB38411.1 | PGLA_07870 | PGLA_20175 | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.460 |