STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAB34158.1AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)    
Predicted Functional Partners:
OAB44168.1
Sporulation transcription factor Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
   
 0.737
OAB34159.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
OAB34160.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.697
OAB34161.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.692
OAB41772.1
Spore gernimation protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.691
OAB43024.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
OAB33898.1
RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.650
OAB46126.1
Spore gernimation protein KA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.634
OAB44268.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
     0.625
OAB34218.1
Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.619
Your Current Organism:
Paenibacillus glacialis
NCBI taxonomy Id: 494026
Other names: DSM 22343, NCCB 100252, P. glacialis, Paenibacillus glacialis Kishore et al. 2010, Paenibacillus sp. KFC91, strain KFC91
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