STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000511655_00613Unannotated protein. (325 aa)    
Predicted Functional Partners:
GCA_000511655_01004
Unannotated protein.
   
 
 0.971
GCA_000511655_00545
Unannotated protein.
  
  
 0.950
GCA_000511655_01012
Unannotated protein.
   
 
 0.947
GCA_000511655_02546
Unannotated protein.
    
 0.941
GCA_000511655_02174
Unannotated protein.
    
 0.938
GCA_000511655_01774
Unannotated protein.
     
 0.929
GCA_000511655_00614
Unannotated protein.
       0.654
GCA_000511655_02100
Unannotated protein.
  
     0.593
GCA_000511655_02386
Unannotated protein.
 
  
 0.554
GCA_000511655_00612
Unannotated protein.
     
 0.522
Your Current Organism:
Psychrobacter sp. TB15
NCBI taxonomy Id: 494416
Other names: P. sp. TB15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.