STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4A49_18983Uncharacterized protein. (88 aa)    
Predicted Functional Partners:
TATA_0
Sec-independent protein translocase protein tata, chloroplastic.
  
 0.970
TATA_1
Sec-independent protein translocase protein tata, chloroplastic.
  
 0.970
TIG
Trigger factor-like protein tig, chloroplastic.
     
 0.536
SRP19
Signal recognition particle 19 kDa protein.
      
 0.493
SR541_0
Signal recognition particle 54 kDa protein 1.
     
 0.453
SR541_1
Signal recognition particle 54 kDa protein 1.
     
 0.453
TATB
Sec-independent protein translocase protein tatb, chloroplastic.
   
  
 0.411
MFDR
NADPH:adrenodoxin oxidoreductase, mitochondrial.
     
 0.407
APR1_2
5'-adenylylsulfate reductase 1, chloroplastic.
  
  
 0.403
APR1_1
5'-adenylylsulfate reductase 1, chloroplastic.
  
  
 0.403
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.