STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCX3Cationcalcium exchanger 3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (642 aa)    
Predicted Functional Partners:
NHX6
Sodiumhydrogen exchanger 6.
   
 
 0.716
HKT1
Sodium transporter hkt1.
   
  
 0.654
CSN4
Cop9 signalosome complex subunit 4.
      
 0.642
PIN6
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
      
 0.640
NHX1
Sodiumhydrogen exchanger 1.
   
 
 0.610
A4A49_26904
Choline monooxygenase, chloroplastic.
     
 0.521
ERF114
Ethylene-responsive transcription factor erf114.
      
 0.515
A4A49_39152
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1.
      
 0.515
MS1_1
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1.
      
 0.515
A4A49_56364
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1.
      
 0.515
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.