STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AP24Osmotin. (249 aa)    
Predicted Functional Partners:
PRR1_1
Pathogenesis-related protein r major form.
  
 
  
0.742
PR-1_2
Pathogenesis-related protein pr-1; Belongs to the CRISP family.
   
  
 0.607
PPOB_1
Catechol oxidase b, chloroplastic.
   
 
 0.594
PPO
Polyphenol oxidase, chloroplastic.
   
 
 0.594
PPOE_2
Polyphenol oxidase e, chloroplastic.
   
 
 0.594
PPOE_0
Polyphenol oxidase e, chloroplastic.
   
 
 0.594
PPOE_1
Polyphenol oxidase e, chloroplastic.
   
 
 0.594
CHN50
Endochitinase b.
   
 
 0.592
PR-1_0
Pathogenesis-related protein pr-1; Belongs to the CRISP family.
   
  
 0.540
ERS1
Putative ethylene response sensor 1.
    
 0.536
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.