STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTX13_1Protein detoxification 13. (61 aa)    
Predicted Functional Partners:
A4A49_27590
Pentatricopeptide repeat-containing protein, mitochondrial.
  
   
 0.550
SAC9_0
Putative phosphoinositide phosphatase sac9.
  
    0.517
A4A49_24481
Uncharacterized protein.
  
    0.510
A4A49_19097
GLTSCR1 domain-containing protein.
  
   
 0.490
A4A49_53335
Uncharacterized protein.
  
     0.489
A4A49_10732
DFRP_C domain-containing protein.
  
     0.485
A4A49_13799
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.446
OCP3
Protein overexpressor of cationic peroxidase 3.
  
     0.439
A4A49_11336
Uncharacterized protein.
  
     0.414
A4A49_26101
Uncharacterized protein.
  
     0.408
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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