BLUS1_7 protein (Nicotiana attenuata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

BLUS1_7

Serinethreonine-protein kinase blus1. (711 aa)

Predicted Functional Partners:

SEC61G2

0.783

ERDJ2A_1

0.695

ERDJ2A_0

0.695

A4A49_03650

0.590

A4A49_11251

0.590

A4A49_25220

0.590

A4A49_36447

0.561

A4A49_20974

0.561

A4A49_59984

0.543

A4A49_16662

0.543

Your Current Organism:

Nicotiana attenuata

NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4A49_03650	A4A49_11251	A0A1J6IMZ8	A0A314KZU0	Uncharacterized protein.	Uncharacterized protein.	0.900
A4A49_03650	A4A49_16662	A0A1J6IMZ8	A0A1J6IWK7	Uncharacterized protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.780
A4A49_03650	A4A49_20974	A0A1J6IMZ8	A0A314KTA6	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.862
A4A49_03650	A4A49_36447	A0A1J6IMZ8	A0A1J6JUQ6	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.862
A4A49_03650	A4A49_59984	A0A1J6IMZ8	A0A1J6I6U7	Uncharacterized protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.780
A4A49_03650	BLUS1_7	A0A1J6IMZ8	A0A1J6II66	Uncharacterized protein.	Serinethreonine-protein kinase blus1.	0.590
A4A49_03650	ERDJ2A_0	A0A1J6IMZ8	A0A314KSE9	Uncharacterized protein.	Dnaj protein erdj2a.	0.989
A4A49_03650	ERDJ2A_1	A0A1J6IMZ8	A0A1J6L6F1	Uncharacterized protein.	Dnaj protein erdj2a.	0.989
A4A49_03650	SEC61G2	A0A1J6IMZ8	A0A1J6INL5	Uncharacterized protein.	Protein transport protein sec61 subunit gamma-2.	0.895
A4A49_11251	A4A49_03650	A0A314KZU0	A0A1J6IMZ8	Uncharacterized protein.	Uncharacterized protein.	0.900
A4A49_11251	A4A49_16662	A0A314KZU0	A0A1J6IWK7	Uncharacterized protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.780
A4A49_11251	A4A49_20974	A0A314KZU0	A0A314KTA6	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.862
A4A49_11251	A4A49_36447	A0A314KZU0	A0A1J6JUQ6	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.862
A4A49_11251	A4A49_59984	A0A314KZU0	A0A1J6I6U7	Uncharacterized protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.780
A4A49_11251	BLUS1_7	A0A314KZU0	A0A1J6II66	Uncharacterized protein.	Serinethreonine-protein kinase blus1.	0.590
A4A49_11251	ERDJ2A_0	A0A314KZU0	A0A314KSE9	Uncharacterized protein.	Dnaj protein erdj2a.	0.989
A4A49_11251	ERDJ2A_1	A0A314KZU0	A0A1J6L6F1	Uncharacterized protein.	Dnaj protein erdj2a.	0.989
A4A49_11251	SEC61G2	A0A314KZU0	A0A1J6INL5	Uncharacterized protein.	Protein transport protein sec61 subunit gamma-2.	0.895
A4A49_16662	A4A49_03650	A0A1J6IWK7	A0A1J6IMZ8	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Uncharacterized protein.	0.780
A4A49_16662	A4A49_11251	A0A1J6IWK7	A0A314KZU0	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	Uncharacterized protein.	0.780