STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MOS4_1Pre-mrna-splicing factor spf27-like protein. (251 aa)    
Predicted Functional Partners:
PRL1
Protein pleiotropic regulatory locus 1.
   
 0.990
PRP19
Pre-mrna-processing factor 19.
   
 0.975
PRP19B
Pre-mrna-processing factor 19-like 2.
   
 0.975
A4A49_24014
Uncharacterized protein.
   
 0.971
A4A49_29394
Uncharacterized protein.
   
 0.971
CDC5_0
Cell division cycle 5-like protein.
   
 0.963
CDC5_2
Cell division cycle 5-like protein.
   
 0.963
CDC5_1
Cell division cycle 5-like protein.
   
 0.963
A4A49_24896
TPR_REGION domain-containing protein.
    
 
 0.938
A4A49_12482
Uncharacterized protein.
    
 
 0.935
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.