Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PERK1_1Proline-rich receptor-like protein kinase perk1. (580 aa)    
Predicted Functional Partners:
CRK4
Cdpk-related kinase 4.
  
  0.485
CRK7_0
Cdpk-related kinase 7; Belongs to the protein kinase superfamily.
  
  0.476
CRK5_1
Cdpk-related kinase 5.
  
  0.474
CRK7_1
Cdpk-related kinase 7; Belongs to the protein kinase superfamily.
  
  0.474
NPK1_2
Mitogen-activated protein kinase kinase kinase npk1; Belongs to the protein kinase superfamily.
  
 
  0.452
CPK24
Calcium-dependent protein kinase 24.
  
 0.446
SRK2H
Serinethreonine-protein kinase srk2h; Belongs to the protein kinase superfamily.
  
 
  0.439
NSL1
Macpf domain-containing protein nsl1.
      
 0.437
GK-2
Guanylate kinase 2.
    
 0.430
V2
Guanylate kinase 2, chloroplasticmitochondrial.
    
 0.430
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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