STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RLP12_6Receptor-like protein 12. (247 aa)    
Predicted Functional Partners:
RLP12_0
Receptor-like protein 12.
  
    0.518
LRX6
Leucine-rich repeat extensin-like protein 6.
  
 
  0.512
A4A49_60093
Putative lrr receptor-like serinethreonine-protein kinase.
  
 
   0.508
A4A49_59506
Putative lrr receptor-like serinethreonine-protein kinase.
  
 
   0.506
A4A49_57305
Putative lrr receptor-like serinethreonine-protein kinase.
  
 
   0.500
A4A49_58266
Putative lrr receptor-like serinethreonine-protein kinase.
  
 
   0.499
A4A49_53942
Putative lrr receptor-like serinethreonine-protein kinase.
  
 
   0.498
A4A49_64913
Putative lrr receptor-like serinethreonine-protein kinase.
  
 
   0.497
A4A49_65715
Uncharacterized protein.
  
 
   0.496
A4A49_61055
Uncharacterized protein.
  
 
   0.496
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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