STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTPA2_1Carboxyl-terminal-processing peptidase 2, chloroplastic. (548 aa)    
Predicted Functional Partners:
FTSH4_0
Atp-dependent zinc metalloprotease ftsh 4, mitochondrial.
   
 0.522
FTSH4_1
Atp-dependent zinc metalloprotease ftsh 4, mitochondrial.
   
 0.522
FTSH11
Atp-dependent zinc metalloprotease ftsh 11, chloroplasticmitochondrial.
   
 0.522
A4A49_28955
Uncharacterized protein.
    
 0.512
PHB3_0
Prohibitin.
   
 
 0.487
PHB3_1
Prohibitin.
   
 
 0.487
PHB3_2
Prohibitin.
   
 
 0.487
A4A49_21784
Prohibitin.
   
 
 0.408
PHB1_1
Prohibitin.
   
 
 0.408
PHB1_0
Prohibitin.
   
 
 0.408
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.