Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
YDA_4Mitogen-activated protein kinase kinase kinase yoda. (618 aa)    
Predicted Functional Partners:
TFT7
14-3-3 protein 7; Belongs to the 14-3-3 family.
    
 
 0.686
A4A49_33886
14-3-3-like protein d; Belongs to the 14-3-3 family.
    
 
 0.581
SPX2_0
Spx domain-containing protein 2.
      
 0.564
YDA_7
Mitogen-activated protein kinase kinase kinase yoda.
    
 0.526
A4A49_21840
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
    
 0.517
TFT4_0
14-3-3 protein 4; Belongs to the 14-3-3 family.
    
 
 0.497
TFT4_1
14-3-3 protein 4; Belongs to the 14-3-3 family.
    
 
 0.497
SIGE
Rna polymerase sigma factor sige, chloroplasticmitochondrial.
      
 0.488
CYCP3-1_2
Cyclin-p3-1.
    
 
 0.465
ETR1_3
Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway.
    
 
 0.465
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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