Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PBS1_7Serinethreonine-protein kinase pbs1; Belongs to the protein kinase superfamily. (360 aa)    
Predicted Functional Partners:
A4A49_00397
Atp-dependent dna helicase, chloroplastic.
   
  
 0.637
EDS1
Protein eds1l.
    
 0.578
A4A49_04885
Protein stichel-like 2.
      
 0.573
UCNL
Serinethreonine-protein kinase ucnl; Belongs to the protein kinase superfamily.
      
 0.555
SGT1
Protein sgt1-like protein.
   
 0.550
A4A49_05391
Thioredoxin y1, chloroplastic.
    
 
 0.508
ARR22_0
Two-component response regulator arr22.
    
 0.477
A4A49_10267
Leucine--trna ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.470
A4A49_06917
Leucine--trna ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.470
BHLH128
Transcription factor bhlh128.
      
 0.462
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.