STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFL1Protein terminal flower 1. (173 aa)    
Predicted Functional Partners:
A4A49_04276
Upf0235 protein.
    
   0.870
A4A49_03058
Uncharacterized protein.
   
 
 0.743
RPL36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.700
RPL5_3
50s ribosomal protein l5, chloroplastic.
   
   0.690
A4A49_23058
Uncharacterized protein.
   
 
 0.689
RPS14
Ribosomal protein s14, mitochondrial.
   
   0.685
A4A49_09174
Trigger_N domain-containing protein.
   
   0.680
A4A49_62532
L51_S25_CI-B8 domain-containing protein.
   
 
 0.678
A4A49_22691
Uncharacterized protein.
   
 
 0.666
A4A49_22622
Uncharacterized protein.
   
 
 0.650
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.