STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APRR7Two-component response regulator-like aprr7. (727 aa)    
Predicted Functional Partners:
PRR37
Two-component response regulator-like prr37.
  
  
 
0.905
PHYA
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 
 0.683
GI_0
Protein gigantea.
   
 
 0.549
GI_1
Protein gigantea.
   
 
 0.545
BHLH
Basic helix-loop-helix protein a.
      
 0.520
TIR1_2
Protein transport inhibitor response 1.
      
 0.510
TIR1_0
Protein transport inhibitor response 1.
      
 0.510
HY5
Transcription factor hy5.
    
 0.508
ADO3
Adagio protein 3.
   
 
 0.458
TIR1_1
Protein transport inhibitor response 1.
      
 0.457
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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