STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4A49_62967Uncharacterized protein. (178 aa)    
Predicted Functional Partners:
HISN1B
Atp phosphoribosyltransferase 2, chloroplastic.
  
 0.768
A4A49_11819
Aspartate--trna ligase, chloroplasticmitochondrial.
  
  
 0.644
A4A49_22599
Methionine--trna ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.625
A4A49_38656
Putative methionine--trna ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.625
A4A49_28357
Putative mitochondrial protein.
   
 0.614
A4A49_29846
S1 motif domain-containing protein.
   
 0.614
HISN2
Histidine biosynthesis bifunctional protein hisie, chloroplastic.
    
 0.597
ALATS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.509
A4A49_19097
GLTSCR1 domain-containing protein.
  
  
 0.424
APC8
Anaphase-promoting complex subunit 8.
  
  
 0.424
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.