STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SS4_1Putative starch synthase 4, chloroplasticamyloplastic. (230 aa)    
Predicted Functional Partners:
SBEI
1,4-alpha-glucan-branching enzyme 1, chloroplasticamyloplastic.
   
 0.971
SBE3
1,4-alpha-glucan-branching enzyme 3, chloroplasticamyloplastic.
   
 0.970
SBE1
1,4-alpha-glucan-branching enzyme.
   
 0.968
WAXY
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
 
 0.963
DPEP
4-alpha-glucanotransferase.
     
 0.951
DPE2_0
4-alpha-glucanotransferase dpe2.
   
 
 0.939
GLGS
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
 
 0.925
NUDT14
Nudix hydrolase 14, chloroplastic.
   
 
 0.915
AGPS1
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
 
 0.890
AGPS3
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
 
 0.890
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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