STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4A49_40794Uncharacterized protein. (639 aa)    
Predicted Functional Partners:
A4A49_22749
WHy domain-containing protein.
  
     0.492
A4A49_24551
Uncharacterized protein.
  
     0.491
A4A49_56088
Uncharacterized protein.
  
     0.491
ZIP2_1
Zinc transporter 2.
  
     0.488
A4A49_39088
WD_REPEATS_REGION domain-containing protein.
  
     0.477
A4A49_01314
Pentatricopeptide repeat-containing protein, chloroplastic.
  
     0.454
A4A49_22045
Importin N-terminal domain-containing protein.
  
     0.454
A4A49_31035
Btbpoz domain-containing protein.
  
     0.452
LSF1
Phosphoglucan phosphatase lsf1, chloroplastic.
  
     0.439
A4A49_26021
Putative membrane protein.
  
     0.437
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.