STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCR1_0Cinnamoyl-coa reductase 1. (332 aa)    
Predicted Functional Partners:
COMT_1
Caffeic acid 3-o-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
   
 
 0.960
A4A49_26590
Putative caffeoyl-coa o-methyltransferase.
  
 
 0.958
A4A49_27763
Putative caffeoyl-coa o-methyltransferase.
  
 
 0.955
CCOAOMT4
Caffeoyl-coa o-methyltransferase 4.
  
 
 0.955
A4A49_33225
Putative caffeoyl-coa o-methyltransferase.
  
 
 0.955
CCOAOMT5
Caffeoyl-coa o-methyltransferase 5.
  
 
 0.954
CCOAOMT6
Caffeoyl-coa o-methyltransferase 6.
  
 
 0.954
4CLL1_0
4-coumarate--coa ligase-like 1.
  
 
 0.953
4CL2_1
4-coumarate--coa ligase 2.
  
 
 0.953
4CLL6_0
4-coumarate--coa ligase-like 6.
  
 
 0.952
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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