STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIP2_3Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (412 aa)    
Predicted Functional Partners:
SDP1_2
Triacylglycerol lipase sdp1.
    
 0.912
SDP1_0
Triacylglycerol lipase sdp1.
    
 0.912
LIP1_3
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
  
  
 
0.906
DWF5
7-dehydrocholesterol reductase.
     
 0.902
DIM_0
Delta(24)-sterol reductase.
     
 0.901
DIM_1
Delta(24)-sterol reductase.
     
 0.901
LIP2_6
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
  
  
 
0.901
LIP2_2
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
  
  
 
0.901
A4A49_10843
Putative acyl-activating enzyme 19.
    
 0.524
RABC1
Ras-related protein rabc1.
      
 0.491
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.