STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFC2_0Replication factor c subunit 2. (309 aa)    
Predicted Functional Partners:
RFC3_0
Replication factor c subunit 3.
  
0.994
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.981
A4A49_52257
PCNA_N domain-containing protein.
  
 0.981
A4A49_10438
Checkpoint protein; Belongs to the HUS1 family.
    
 0.981
A4A49_04885
Protein stichel-like 2.
   
 0.973
A4A49_40236
Protein stichel-like 3.
   
 0.973
STI
Protein stichel.
   
 0.973
A4A49_44618
Uncharacterized protein.
   
 0.972
A4A49_23513
Uncharacterized protein.
   
 0.972
RAD17
Cell cycle checkpoint protein rad17.
    
 0.969
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.