STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4A49_40854Putative LRR receptor-like serine/threonine-protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1100 aa)    
Predicted Functional Partners:
PERX_8
Suberization-associated anionic peroxidase.
    
 0.676
A4A49_56478
Ap2-like ethylene-responsive transcription factor.
    
 0.672
A4A49_16909
Ap2-like ethylene-responsive transcription factor.
    
 0.672
A4A49_05297
Ap2-like ethylene-responsive transcription factor.
    
 0.672
A4A49_32573
Ap2-like ethylene-responsive transcription factor.
    
 0.672
A4A49_14482
Ap2-like ethylene-responsive transcription factor.
    
 0.672
CSN4
Cop9 signalosome complex subunit 4.
    
 0.596
BADH
Betaine aldehyde dehydrogenase, chloroplastic; Belongs to the aldehyde dehydrogenase family.
     
 0.592
ALDH10A8
Betaine aldehyde dehydrogenase 1, chloroplastic; Belongs to the aldehyde dehydrogenase family.
     
 0.592
PEX10
Peroxisome biogenesis factor 10.
      
 0.584
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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