Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDKB2-2Cyclin-dependent kinase b2-2; Belongs to the protein kinase superfamily. (312 aa)    
Predicted Functional Partners:
CYCA1-3
Cyclin-a1-3; Belongs to the cyclin family.
   
 0.949
WEE1
Wee1-like protein kinase.
   
 0.943
RBR1
Retinoblastoma-related protein 1.
   
 0.937
CYCH1-1
Cyclin-h1-1; Belongs to the cyclin family.
    
 0.907
CYCA3-2_2
Cyclin-a3-2; Belongs to the cyclin family.
   
 0.903
CYCA3-2_0
Cyclin-a3-2; Belongs to the cyclin family.
   
 0.902
CDC25
Dual specificity phosphatase cdc25.
   
 0.896
CYCA2-1_1
Cyclin-a2-1; Belongs to the cyclin family.
   
 0.892
CYCA2-1_0
Cyclin-a2-1; Belongs to the cyclin family.
   
 0.892
CYCA2-1_2
Cyclin-a2-1; Belongs to the cyclin family.
   
 0.892
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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