Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
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PERK2_1Proline-rich receptor-like protein kinase perk2. (523 aa)    
Predicted Functional Partners:
PDR3
Pleiotropic drug resistance protein 3; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
      
 0.708
XLT2_4
Xyloglucan galactosyltransferase xlt2; Belongs to the glycosyltransferase 47 family.
      
 0.523
SPL1_0
Squamosa promoter-binding-like protein 1.
    
 0.513
SPL1_2
Squamosa promoter-binding-like protein 1.
    
 0.513
A4A49_03838
Methyltransf_11 domain-containing protein.
      
 0.494
A4A49_35937
Methyltranfer_dom domain-containing protein.
      
 0.494
A4A49_30819
Uncharacterized protein.
      
 0.494
MED21
Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.492
PCMP-H61_2
Pentatricopeptide repeat-containing protein.
      
 0.492
PCMP-E78_1
Pentatricopeptide repeat-containing protein.
      
 0.492
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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