STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4A49_12117Putative transcriptional regulatory protein. (323 aa)    
Predicted Functional Partners:
A4A49_11819
Aspartate--trna ligase, chloroplasticmitochondrial.
  
  
 0.818
TIG
Trigger factor-like protein tig, chloroplastic.
  
  
 0.721
EFTS_0
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
  
 0.716
EFTS_1
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
  
 0.716
SS3
Soluble starch synthase 3, chloroplasticamyloplastic.
    
  0.685
DRT101
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P. Belongs to the phosphohexose mutase family.
    
  0.643
A4A49_07870
Uncharacterized protein.
    
  0.643
A4A49_15800
Uncharacterized protein.
    
  0.643
A4A49_09774
50s ribosomal protein l19-1, chloroplastic.
  
 
 0.621
A4A49_00930
50s ribosomal protein l19-1, chloroplastic.
  
 
 0.621
Your Current Organism:
Nicotiana attenuata
NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson
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